PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.W1EXI
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 518aa    MW: 57707.3 Da    PI: 7.0731
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.W1EXIgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.60.000534134451855
                  HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +++  L++++ +      +K + a++L +A+ YIk Lq
  Araip.W1EXI 413 DKITALQQIVSPF-----GKTDTASVLFEAIGYIKFLQ 445
                  7888889988887.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.343395444IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.2E-8410452IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.22E-9410460IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.46E-4413449No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 518 aa     Download sequence    Send to blast
MAEGCGGNSV ATTSPASFNW WYLHANHATN TNAYNNHHHH QTNPNNSSSC SCEEDISVST  60
SFTNASNHST LTVDSSRRLL DPSSNNNHFL PEHAEDNHLW NHVLSAVGSN GELHNNEEMG  120
EMKFLDALSS KNMTSSMFEE PACDYLKKLD TTTSWEYSGG STSSSFNNSF EKHLNNNNNN  180
NGFSDDALIE NNERLTKLSN LVSTWSIAPP DPEVSSSHFD HPPTNNNHHQ FPQSHHHHDP  240
NCNFKQQVFI GDSTSYPPIS SYDHPTKVKE EFHHHQTNSG FQNGLINGLS SVMGGDSGNK  300
FYHGLPNLSS CTRNISDVIS FNSRLGRPVL GIHAQKPNIK YMNNLSESKK QQGLQTTPPI  360
NRSNNGRVEG TTAREVKKKR SEESSEAILK KPKQDTSTAS STKVQAPKVK LGDKITALQQ  420
IVSPFGKTDT ASVLFEAIGY IKFLQEQVQL LSNPYLKSNS HKDPWGSLDR KDHHKEDAKL  480
DLRTRGLCLV PTSCTPLIYR ENSGPDYWTP AYRGCLYR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016177515.10.0PREDICTED: transcription factor bHLH111
TrEMBLA0A0B2S1270.0A0A0B2S127_GLYSO; Transcription factor bHLH111
TrEMBLI1LCV30.0I1LCV3_SOYBN; Uncharacterized protein
STRINGGLYMA10G35040.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF101162629
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31050.16e-54bHLH family protein